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Polymorph for 1135 accessions now available

Polymorph, our tool for querying SNPs, insertions, and deletions is now available for the 1135 data set.

http://tools.1001genomes.org/polymorph

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AraPheno now online

AraPheno is a public database collection of Arabidopsis thaliana phenotypes. This Database allows to search and filter for public phenotypes and to obtain additional meta-information. AraPheno is available at http://arapheno.1001genomes.org

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AraGeno: An easy way to identify your Arabidopsis thaliana plant

AraGeno Web App is available at https://arageno.gmi.oeaw.ac.at

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NAR: Publication on AraPheno is now online

Ümit Seren, Dominik Grimm, Joffrey Fitz, Detlef Weigel, Magnus Nordborg, Karsten Borgwardt, Arthur Korte.
AraPheno: a public database for Arabidopsis thaliana phenotypes
Nucleic Acids Res (2017) 45 (D1): D1054-D1059.

Summary

Natural genetic variation makes it possible to discover evolutionary changes that have been maintained in a population because they are advantageous.

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Cell: 1001 Epigenomes published

Kawakatsu, TaijiAlonso-Blanco, Carlos et al.
Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
Cell , Volume 166 , Issue 2 , 492 – 505

Summary

The epigenome orchestrates genome accessibility, functionality, and three-dimensional structure. Because epigenetic variation can impact transcription and thus phenotypes, it may contribute to adaptation.

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